Research Projects:
Overview:
The biomedical science
disciplines are witnessing a profound shift in emphasis: simplistic
models are no longer satisfactory, and more detailed mathematical
understanding of complex properties and phenomena are required. I am
an interdisciplinary mathematician whose current research interest
is predominantly focused at the interface of applied mathematics and
its application to the biomedical sciences. This is the area of
research that has come to be known as mathematical biology or
biomathematics. Mathematical biology is a fast growing subject,
which has gained significant attention and importance in recent
years and it is, arguably, one of the most exciting
application-oriented sub-disciplines of mathematics. My research
work, to date, is in four (4) areas of mathematical biology: (i)
Muscle Physiology, (ii) Lung Physiology, (iii) Renal Physiology, and
(iv)
Developmental Biology.
Muscle Physiology:
Molecular Muscle Mechanics: A new generation of
optical trapping techniques, namely laser tweezers, are currently
being used to measure forces and displacements of individual myosin
molecules. Results from these studies have hitherto attracted
different models of data analysis and interpretation. As a result,
differing estimates of the myosin working stroke or step size have
been postulated. These differences could stem from complicating
factors such as Brownian (thermal) noise acting on the laser trap
assay. My main objective in these studies is to develop mathematical
models for actomyosin interaction at the molecular level, which
incorporate strain-dependent displacements, ATP hydrolysis,
viscosity and Brownian noise acting on the actomyosin system. I have
developed new mathematical models, based on stochastic Langevin
dynamics, coupled with the kinetics for actomyosin interaction.
Renal Physiology: Hemodialysis Therapy:
This modeling challenge is to construct realistic model mechanisms
that capture key physiological processes that may be involved in
acid-base homeostasis associated with end-stage renal diseases
(ESRD), and show how they are orchestrated. Metabolic acidosis, for
example, in patients with ESRD still remains a problem despite major
technical advances in alkali delivery during hemodialysis treatment.
The proposed work aims to gain insight into the factors regulating
body bicarbonate stores in patients receiving
hemodialysis treatment, and to use this knowledge to construct
testable mathematical models that will allow us to study, in more
detail, (i) the overall nature of solute transfer across dialysis
membranes, (ii) the body's response to this rapid alkalinization
during the dialysis (intradialytic) period, (iii) the events
influencing body alkali stores during the post-dialysis
(interdialytic) period, and (iv) the overall variation in solute exchange
between dialysate, blood and the body compartments. The long-term
objective is to couple our model mechanisms, their refinements, and
computations to direct clinical measurements in order to acquire the
information needed to determine the most appropriate approach to
rectify the metabolic acidosis in patients receiving hemodialysis
treatment.
Lung
Physiology: Aerosol Deposition in the Acinus:
This long-term
study will focus on the development of new mathematical models for
the interaction, transport, deposition, and elimination of aerosol
particles in the acinus. Specific problems to be
studied will include particle size analysis and modeling;
deposition, translocation, and clearance in the lungs. Of
particular interest to us, and alongside some of the activities of
NASA, is the role that gravity plays in the deposition of inhaled
aerosol particles in the respiratory tract and in the acinus, and
how extended periods of microgravity and the hazards of closed space
environment affect pulmonary function. Aerosol studies in
microgravity have shown unexpectedly high deposition. Factors
attributing to this observation are yet to be known. Thus, studies
of this nature will be extremely useful in understanding the factors
that cause inhaled particulate matter to have high deposition rate,
and adverse health consequences that are both prevalent on the
ground and in space flights. The experience on Mir space station
with frequent fires and the release of toxic gases is testament to
the fact that the lung is one of the most vulnerable organs in the
body in terms of space travel.
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